The detailed information of tRNA gene sequence


Sequence ID>WENV170000041
Genome IDAERA01002210
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 23151
End posion on genome 23226
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgattgaaat
tRNA gene sequence 
ACGGGCATAGCTCAATTGGTAGAGCGACGGTCTCCAAAACCGTAGGCTGGGGGTTCAAGT
CCTCCTGCCCGTGCAA
Downstream region at tRNA end position 
caggagcacc
Secondary structure (Cloverleaf model)
>WENV170000041	Trp	CCA
                   t      GCAA caggagcacc
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C C T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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