The detailed information of tRNA gene sequence


Sequence ID>ENV08001812
Genome IDABOG01010630
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 100
End posion on genome 27
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cctcggacga
tRNA gene sequence 
AGTCCCGTGGTGTAGTGGCCAATCATGACGGCCTTTGGAGCCGTCGACGGCGGTTCGAAT
CCGCCCGGGACTACtg
Downstream region at tRNA end position 
tcacatcggc
Secondary structure (Cloverleaf model)
>ENV08001812	Gln	TTG
                   a      ACtg tcacatcggc
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       T G T G       G G C G G     C
    G         | | +                 T T
    C       T C A T
      C A A        G     CGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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