The detailed information of tRNA gene sequence


Sequence ID>WENV170000100
Genome IDAERA01011196
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 188
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taagatgtac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCCTCCCGTGCAA
Downstream region at tRNA end position 
aaacggaatt
Secondary structure (Cloverleaf model)
>WENV170000100	Trp	CCA
                   c      GCAA aaacggaatt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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