The detailed information of tRNA gene sequence


Sequence ID>WENV170000150
Genome IDAERA01017288
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 752
End posion on genome 841
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcggccttc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGTACCTGACTCGAAATCAGGCATACGTGCAAGCGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatcaaatca
Secondary structure (Cloverleaf model)
>WENV170000150	Ser	CGA
                   c      GCCA gatcaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        A     CATACGTGCAAGCGTATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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