The detailed information of tRNA gene sequence


Sequence ID>ENV08001813
Genome IDABOG01010958
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 32
End posion on genome 103
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgccgatgat
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGAGCCCGGGTTCAAATC
CCGGCCTAGGCTtcc
Downstream region at tRNA end position 
ggtgcgagnn
Secondary structure (Cloverleaf model)
>ENV08001813	Thr	GGT
                   t      Ttcc ggtgcgagnn
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T T C G       C C G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGAGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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