The detailed information of tRNA gene sequence


Sequence ID>WENV170000195
Genome IDAERA01022352
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 237
End posion on genome 313
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
taaaaagcgt
tRNA gene sequence 
CGGGGAATAGCTCAGCCTGGTAGAGCACTGCGTTCGGGACGCAGGGGCCGGAGGTTCGAA
TCCTCTTTCCCCGACCA
Downstream region at tRNA end position 
ccaattcccg
Secondary structure (Cloverleaf model)
>WENV170000195	Pro	CGG
                   t      ACCA ccaattcccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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