The detailed information of tRNA gene sequence


Sequence ID>WENV170000196
Genome IDAERA01022418
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 91
End posion on genome 7
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cttccagtaa
tRNA gene sequence 
GGGCAGGTGGCGGAATCGGCAGACGCGACGGCCTCAAAAGTCGTTGGGCTTACGCTCGTG
AGGGTTCGACTCCCTCCCTGCCCACtc
Downstream region at tRNA end position 
tcaannnnnn
Secondary structure (Cloverleaf model)
>WENV170000196	Leu	CAA
                   a      ACtc tcaannnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T C
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCTTACGCTCGT
                    A - T
                    C - G
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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