The detailed information of tRNA gene sequence


Sequence ID>WENV170000254
Genome IDAERA01035650
Search identical group
Phylum/Class[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
Species
Start position on genome 181
End posion on genome 106
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnnagT
tRNA gene sequence 
AGCCCGGTAGCTCAGTTGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCCCGGCCACCAc
Downstream region at tRNA end position 
tttcccaaaa
Secondary structure (Cloverleaf model)
>WENV170000254	Phe	GAA
                   T      CCAc tttcccaaaa
                     A   A
                     G - C
                     C   C
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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