The detailed information of tRNA gene sequence


Sequence ID>WENV170000319
Genome IDAEWW01010662
Search identical group
Phylum/Class[AEWW] ant fungus garden metagenome; Atta cephalotes fungus garden
Species
Start position on genome 1483
End posion on genome 1413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnaaaa
tRNA gene sequence 
AGCGAAGTAGTGTAACGGTCGCACAATAGCTTCATAATCTGTTAGATTGGGTTCAATTCC
TAATTTCGCTAtat
Downstream region at tRNA end position 
aatataataa
Secondary structure (Cloverleaf model)
>WENV170000319	Met	CAT
                   a      Atat aatataataa
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G + T          T T
                    T     A A T C C     A
        A A        A      | | + | |     A
      C     T G T G       T T G G G     C
      G     + | | |                 T T
      G     G C A C
        T C        A     TAGA
                    A - T
                    T + G
                    A - T
                    G - C
                    C   T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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