The detailed information of tRNA gene sequence


Sequence ID>WENV170000438
Genome IDAEWW01032054
Search identical group
Phylum/Class[AEWW] ant fungus garden metagenome; Atta cephalotes fungus garden
Species
Start position on genome 318
End posion on genome 232
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgccaattt
tRNA gene sequence 
AGAAGAGTGGCGAAACTGGTAGCCGCAACGGACTGCTAATCCGTAGTCCTTCGGGGCTTG
AGAGTTCAAGTCTCTCCTCTTCTGCCA
Downstream region at tRNA end position 
aataccctcg
Secondary structure (Cloverleaf model)
>WENV170000438	Ser	GCT
                   t      GCCA aataccctcg
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C T C T C     A
      C A A        G      | | | | |     A
    T       A G C G       G A G A G     C
    G         | | |                 T T
    G       C C G C
      T A G        A     AGTCCTTCGGGGCTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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