The detailed information of tRNA gene sequence


Sequence ID>WENV170000541
Genome IDAFSR01000140
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 13232
End posion on genome 13140
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgctcT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCTTCCTGCTAAGAAGTTACGGGGCCCAAAAGC
TCCGTCGAGGGTTCGAATCCCTCCCTCTCCGTtg
Downstream region at tRNA end position 
ttgtggccag
Secondary structure (Cloverleaf model)
>WENV170000541	Ser	GCT
                   T      GTtg ttgtggccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TACGGGGCCCAAAAGCTCCGTC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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