The detailed information of tRNA gene sequence


Sequence ID>WENV170000579
Genome IDAFSR01000560
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 14727
End posion on genome 14636
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcataacagg
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTTGTAATGCAGTCGTCTTGAAAACGACCGGCCCTTCAACAAG
GCCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tccaggacaa
Secondary structure (Cloverleaf model)
>WENV170000579	Ser	TGA
                   g      GCCA tccaggacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  T           | | |                 T T
  T         A T G C
    G T A          A     CGGCCCTTCAACAAGGCCC
                    G - C
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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