The detailed information of tRNA gene sequence


Sequence ID>WENV170000605
Genome IDAFSR01001037
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3784
End posion on genome 3858
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gagcggtcgc
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCATCGGTCTTACAAGCCGAGGGTCACTGGTTCGAGCC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
cgtcgcattc
Secondary structure (Cloverleaf model)
>WENV170000605	Val	TAC
                   c      ACCA cgtcgcattc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     T G A C C     A
        G A        A      | | | | |     G
      T     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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