The detailed information of tRNA gene sequence


Sequence ID>WENV170000730
Genome IDAFSR01002560
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1733
End posion on genome 1822
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatctgacac
tRNA gene sequence 
GGGGAGGTCGCATAGTGGCTGAGTGCGGCGGTTTGCTAAACCGCTAGGGGGGCAACCCCC
TCGAGGGTTCGAATCCCTCTCTCCCCGCCA
Downstream region at tRNA end position 
ccagcactcg
Secondary structure (Cloverleaf model)
>WENV170000730	Ser	GCT
                   c      GCCA ccagcactcg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      T G A        G     TAGGGGGGCAACCCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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