The detailed information of tRNA gene sequence


Sequence ID>WENV170000798
Genome IDAFSR01005034
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 657
End posion on genome 748
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagctactg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGATAGGCAGGAAACT
CCTATCCGAGGGTTCGAATCCCTCCCTCTCCGttc
Downstream region at tRNA end position 
cggtatggac
Secondary structure (Cloverleaf model)
>WENV170000798	Ser	GCT
                   g      Gttc cggtatggac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATAGGCAGGAAACTCCTATCC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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