The detailed information of tRNA gene sequence


Sequence ID>WENV170000951
Genome IDAGBJ01000003
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 30455
End posion on genome 30380
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attgttgcgt
tRNA gene sequence 
AGGCTCGTAGCTTAATTGGCAAAGCGGCGGTCTCCAAAACCGAAGAGTGCGGGTTCAATT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
ttcttttatt
Secondary structure (Cloverleaf model)
>WENV170000951	Trp	CCA
                   t      GCCA ttcttttatt
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       T T C G       G C G G G     C
    G       | | | |                 T T
    G       A A G C
      C A          G     AGAGT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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