The detailed information of tRNA gene sequence


Sequence ID>WENV170000996
Genome IDAGBJ01000259
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 5120
End posion on genome 5212
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtagttttt
tRNA gene sequence 
GGAGAGATGACCGAGTCGGTTTATGGTGCGCGCCTGCTAAGCGTGTGTGGGGCTTAAACT
TCACCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttatat
Secondary structure (Cloverleaf model)
>WENV170000996	Ser	GCT
                   t      GCCA ttttttatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     G
  G         G C C A       C A G G G     C
  G         + | | |                 T T
  T         T G G T
    T T A          G     TGTGGGGCTTAAACTTCACC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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