The detailed information of tRNA gene sequence


Sequence ID>WENV170001009
Genome IDAGBJ01000439
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 1152
End posion on genome 1062
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catttttaat
tRNA gene sequence 
GGAGAGATGCCAGAGCGGTCGAATGGGACGGTCTCGAAAATCGTTGTCCGTCAGTGACGG
ACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttaaggttt
Secondary structure (Cloverleaf model)
>WENV170001009	Ser	CGA
                   t      GCCA tttaaggttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCCGTCAGTGACGGACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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