The detailed information of tRNA gene sequence


Sequence ID>WENV170001038
Genome IDAGBJ01001339
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 929
End posion on genome 832
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaccatttt
tRNA gene sequence 
GGAAGTGGAAAGCTCACTGGTGGGGCTCCCGGACTTCAAATCCGGTGCGCGGGGCTAGAA
CCCTCGCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ataaggatcc
Secondary structure (Cloverleaf model)
>WENV170001038	SeC(p)	TCA
                   t      GCCA ataaggatcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGCGCGGGGCTAGAACCCTCGCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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