The detailed information of tRNA gene sequence


Sequence ID>WENV170001044
Genome IDAGBJ01001446
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 197
End posion on genome 273
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttatttaag
tRNA gene sequence 
GGCGACGTAGCTCAGTTGGTTAGAGCATCGGAATCATAATCCGGGTGTCCGGGGTTCGAA
TCCCTGCGTCGCTACCA
Downstream region at tRNA end position 
ttacaattaa
Secondary structure (Cloverleaf model)
>WENV170001044	Met	CAT
                   g      ACCA ttacaattaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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