The detailed information of tRNA gene sequence


Sequence ID>WENV170001057
Genome IDAGBJ01001790
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 732
End posion on genome 824
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tattatgggt
tRNA gene sequence 
GGAGAGATGGCAGAGTCCGGTTAAATGCGCCGCACTCGAAATGCGGTTTCCGATTTTTTC
GGAACGGGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
tgaaacttta
Secondary structure (Cloverleaf model)
>WENV170001057	Ser	CGA
                   t      GCAA tgaaacttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
    C T G A        G      + + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T A A        G     TTTCCGATTTTTTCGGAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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