The detailed information of tRNA gene sequence


Sequence ID>WENV170001060
Genome IDAGBJ01001800
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 1668
End posion on genome 1592
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCTCAGGTTCGAA
TCCTGACCCCGCTACCA
Downstream region at tRNA end position 
agaaaaatga
Secondary structure (Cloverleaf model)
>WENV170001060	Met	CAT
                   n      ACCA agaaaaatga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       T C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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