The detailed information of tRNA gene sequence


Sequence ID>WENV170001067
Genome IDAGBJ01002230
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 213
End posion on genome 123
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccccccaat
tRNA gene sequence 
GGAGGGATGTCCGAGTGGTTTAAGGAGGCGGTCTTGAAAACCGTTGTCTGCTTAAGGTGG
ACCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ggaaatttaa
Secondary structure (Cloverleaf model)
>WENV170001067	Ser	TGA
                   t      GCCA ggaaatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTCTGCTTAAGGTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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