The detailed information of tRNA gene sequence


Sequence ID>WENV170001090
Genome IDAGBJ01003746
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 355
End posion on genome 262
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaaaataac
tRNA gene sequence 
GGAGAGATGTCCGAGTTGGCTTAAGGAGCGCGACTGGAAATCGCGTGTACTACCACAAGT
GGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacactgt
Secondary structure (Cloverleaf model)
>WENV170001090	Ser	GGA
                   c      GCCA gatacactgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G G G G G     C
  G           | | |                 T T
  C         A G G A
    T T A          G     TGTACTACCACAAGTGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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