The detailed information of tRNA gene sequence


Sequence ID>WENV170001100
Genome IDAGBJ01004489
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 566
End posion on genome 641
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtatcgttT
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTTAGAGCGCTACGTTCACATCGTAGAGGTCACTGGTTCGAA
TCCAGTATCACCCATat
Downstream region at tRNA end position 
ttttttatca
Secondary structure (Cloverleaf model)
>WENV170001100	Val	CAC
                   T      ATat ttttttatca
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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