The detailed information of tRNA gene sequence


Sequence ID>WENV170001136
Genome IDAGBJ01007003
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 80
End posion on genome 155
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaacatac
tRNA gene sequence 
GGGCCCATAGCTCATCTGGTAGAGCTCCCGGCTCATAACCGGGCGGTGAGAGGTTCGACC
CCTCTTGGGCCCACCA
Downstream region at tRNA end position 
tctttctttt
Secondary structure (Cloverleaf model)
>WENV170001136	Met	CAT
                   c      ACCA tctttctttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C C
                    T     T C T C C     A
      C T A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     CGGTG
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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