The detailed information of tRNA gene sequence


Sequence ID>WENV170001148
Genome IDAGBJ01007675
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 461
End posion on genome 388
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGCGACGTACCCAAGTGGCTAAGGGGGAGGTCTGCAAAATCTTTACGCGCCGGTTCGAAT
CCGGCCGTCGCCTCat
Downstream region at tRNA end position 
taaaatgccg
Secondary structure (Cloverleaf model)
>WENV170001148	Cys	GCA
                   t      TCat taaaatgccg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          G     TACGC
                    G + T
                    A - T
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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