The detailed information of tRNA gene sequence


Sequence ID>WENV170001220
Genome IDAGBK01002700
Search identical group
Phylum/Class[AGBK] hypersaline lake metagenome; extremely saline anoxic brine of the deep-sea hypersaline anoxic lake (DHAL) Thetis located
Species
Start position on genome 467
End posion on genome 555
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgtacacat
tRNA gene sequence 
GGAGGGGTGACCGAATCTGGCAAGGAGCCGGTCTCGAAAACCGGTAAGGCCGTATGGCCC
TGTGGGTTCGAGTCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
aaactcgcgc
Secondary structure (Cloverleaf model)
>WENV170001220	Ser	CGA
                   t      GCCA aaactcgcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    C       G C C A       G T G G G     C
    T         | |                   T T
    G       A G G A
      G C A        G     TAAGGCCGTATGGCCCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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