The detailed information of tRNA gene sequence


Sequence ID>WENV170001379
Genome IDAGFS01023788
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 360
End posion on genome 270
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnncgctgt
tRNA gene sequence 
GGAGCGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTAATAGCCC
ACCGCGGGTTCGAATCCCGCCTGCTCCGCCA
Downstream region at tRNA end position 
aatgacaaaa
Secondary structure (Cloverleaf model)
>WENV170001379	Ser	GGA
                   t      GCCA aatgacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTAATAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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