The detailed information of tRNA gene sequence


Sequence ID>WENV170001388
Genome IDAGFS01025238
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 207
End posion on genome 296
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctgccatcc
tRNA gene sequence 
GGAGGTTTGGGTGAGTGGTTTAAACCAGCAGTCTTGAAAACTGCCGAAGGAGTGATCCTT
CCGTGAGTTCGAATCTCACAGCCTCCGCCA
Downstream region at tRNA end position 
caaaaacaac
Secondary structure (Cloverleaf model)
>WENV170001388	Ser	TGA
                   c      GCCA caaaaacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G T G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGAAGGAGTGATCCTTCC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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