The detailed information of tRNA gene sequence


Sequence ID>WENV170001981
Genome IDAGFT01058645
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 43675
End posion on genome 43764
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgattatat
tRNA gene sequence 
AGAGAGTTGGATGAGAGGCTTAAGTCGCTTCCCTGCTAAGGAAGTGTGGGATTAGTTCCA
CCGAGGGTTCGAATCCCTCACTCTCTGCCA
Downstream region at tRNA end position 
cattaacgat
Secondary structure (Cloverleaf model)
>WENV170001981	Ser	GCT
                   t      GCCA cattaacgat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    C       A G T C
      T T A        G     TGTGGGATTAGTTCCACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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