The detailed information of tRNA gene sequence


Sequence ID>WENV170002184
Genome IDAGSF01000030
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 9818
End posion on genome 9889
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taaattgtgc
tRNA gene sequence 
GGGCGATTAGCACAGTGGTAGCGCACTTCCTTCACACGGAAGGGGTCATGGGTTCAAATC
CCGTATCGCCCAtta
Downstream region at tRNA end position 
aaatcatcgt
Secondary structure (Cloverleaf model)
>WENV170002184	Val	CAC
                   c      Atta aaatcatcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
        G A        A      | + | | |     A
      T     C A C G       A T G G G     C
      G     |   | |                 T T
      G     G C G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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