The detailed information of tRNA gene sequence


Sequence ID>WENV170002192
Genome IDAGSF01000112
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 1436
End posion on genome 1518
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caaccmaaaa
tRNA gene sequence 
GGGCGGGTGGCGGAATTGGTAGACGCACCGCACTCAAAATGCGGCGGCTTCGGTCATAAG
AGTTCAAGTCTCTTCCCGCCCACtg
Downstream region at tRNA end position 
caaagcccta
Secondary structure (Cloverleaf model)
>WENV170002192	Leu	CAA
                   a      ACtg caaagcccta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       A A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCTTCGGTCAT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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