The detailed information of tRNA gene sequence


Sequence ID>WENV170002235
Genome IDAGSF01001006
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 3329
End posion on genome 3239
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgtcatcT
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTAAGGGTGTTATCACC
CTTCGGGGGTTCGAATCCCCCCCTCTCCGTtc
Downstream region at tRNA end position 
tattcaatcc
Secondary structure (Cloverleaf model)
>WENV170002235	Ser	GCT
                   T      GTtc tattcaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGGGTGTTATCACCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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