The detailed information of tRNA gene sequence


Sequence ID>WENV170002268
Genome IDAGSF01002181
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 279
End posion on genome 205
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aattatctac
tRNA gene sequence 
GGGCAATTAGCACAGTGGTAGCGCACTTCCTTCACACGGAAGGGGTCGCAGGTTCAAATC
CTGCATTGCCCATCA
Downstream region at tRNA end position 
aaaattttaa
Secondary structure (Cloverleaf model)
>WENV170002268	Val	CAC
                   c      ATCA aaaattttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T A
                    T     C G T C C     A
        G A        A      | | | | |     A
      T     C A C G       G C A G G     C
      G     |   | |                 T T
      G     G C G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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