The detailed information of tRNA gene sequence


Sequence ID>WENV170002291
Genome IDAGSF01005258
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 730
End posion on genome 805
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttaggcaT
tRNA gene sequence 
CGGGATGTAGCGCAGCTTGGTAGCGCACCGCGTTCGGGACGCGGGGGTCGTAGGTTCAAA
TCCTATCATCCCGATtt
Downstream region at tRNA end position 
tgtctattgt
Secondary structure (Cloverleaf model)
>WENV170002291	Pro	CGG
                   T      ATtt tgtctattgt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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