The detailed information of tRNA gene sequence


Sequence ID>WENV170002309
Genome IDAGSF01009838
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 486
End posion on genome 413
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caaaaaacga
tRNA gene sequence 
GGGACAGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCTGTCCCGttc
Downstream region at tRNA end position 
tctcgtaaat
Secondary structure (Cloverleaf model)
>WENV170002309	Asp	GTC
                   a      Gttc tctcgtaaat
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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