The detailed information of tRNA gene sequence


Sequence ID>WENV170002338
Genome IDAGSF01016951
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 971
End posion on genome 1044
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcctagatgc
tRNA gene sequence 
GGGAGTATAGCTCAGTTGGTTAGAGCAGGTGACTCTTAATCTCAAGGTCGAAGGTTCAAG
TCCTTCTACTCCCAtcc
Downstream region at tRNA end position 
caaatccctc
Secondary structure (Cloverleaf model)
>WENV170002338	Lys	CTT
                   c      Atcc caaatccctc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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