The detailed information of tRNA gene sequence


Sequence ID>WENV170002339
Genome IDAGSF01017311
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 1518
End posion on genome 1442
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcttagatgc
tRNA gene sequence 
GGGAGTATAGCTCAGTTGGTTAGAGCAGGTGACTCTTAATCTCAAGGTCGAAGGTTCAAG
TCCTTCTACTCCCATCA
Downstream region at tRNA end position 
acgttagtcg
Secondary structure (Cloverleaf model)
>WENV170002339	Lys	CTT
                   c      ATCA acgttagtcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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