The detailed information of tRNA gene sequence


Sequence ID>WENV170002409
Genome IDAGTN01021194
Search identical group
Phylum/Class[AGTN] bioreactor metagenome; poplar biomass
Species
Start position on genome 240
End posion on genome 327
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcttttcttt
tRNA gene sequence 
GGGAGAGTGGCTGAGAGGTTTAAGGCAGCGGCTTGCTAAGTCGTCGACCCGCAAGGGTCC
CTGGGTTCGAATCCCAGTTCTTCCGCCA
Downstream region at tRNA end position 
cccaattctt
Secondary structure (Cloverleaf model)
>WENV170002409	Ser	GCT
                   t      GCCA cccaattctt
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G + T          T A
                    T     G A C C C     A
      A G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGACCCGCAAGGGTCC
                    G + T
                    C - G
                    G - C
                    G + T
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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