The detailed information of tRNA gene sequence


Sequence ID>ENV08001842
Genome IDABOG01025749
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 33
End posion on genome 107
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccggtggtag
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATATTGCCCTCTCACGGCAATGACCAGGGTTCAA
ATCCCTGACGGAGCAtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001842	Glu	CTC
                   g      Atnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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