The detailed information of tRNA gene sequence


Sequence ID>WENV170003727
Genome IDAGTN01428517
Search identical group
Phylum/Class[AGTN] bioreactor metagenome; poplar biomass
Species
Start position on genome 106
End posion on genome 11
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggaaatttct
tRNA gene sequence 
GGAAGAGAATCGTCCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGCGAGCCG
GTCCTTGGTGGGTTCGACTCCCTCTCTCTTCCGCCA
Downstream region at tRNA end position 
ggttttagtc
Secondary structure (Cloverleaf model)
>WENV170003727	SeC(p)	TCA
                   t      GCCA ggttttagtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GAGGGGCCGCGAGCCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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