The detailed information of tRNA gene sequence


Sequence ID>WENV170004416
Genome IDAGTN01671977
Search identical group
Phylum/Class[AGTN] bioreactor metagenome; poplar biomass
Species
Start position on genome 85
End posion on genome 177
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accaagttat
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGTTGAAGGGATCGGTCTTGAAAACCGACAGGTCATGAGAGT
GGCGCAGGGGTTCGAATCCCTTTTCCTCCGCCA
Downstream region at tRNA end position 
ttttaggtaa
Secondary structure (Cloverleaf model)
>WENV170004416	Ser	TGA
                   t      GCCA ttttaggtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       A G G G G     C
  G           | | |                 T T
  G         A G G G
    T T G A        A     CAGGTCATGAGAGTGGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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