The detailed information of tRNA gene sequence


Sequence ID>WENV170004647
Genome IDAHKK01000090
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 1536
End posion on genome 1612
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
attcttctaT
tRNA gene sequence 
GTCTCGGTAGCACAATTGGTAGTTGCACATGGCTGTTAACCATGAGGTTGGCGGTTCGAG
TCCGCTCCGAGACGTCg
Downstream region at tRNA end position 
ggcttgtagc
Secondary structure (Cloverleaf model)
>WENV170004647	Asn	GTT
                   T      GTCg ggcttgtagc
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     T C G C C     A
      T A A        A      + | | | |     G
    T       C A C G       G G C G G     C
    G         | | |                 T T
    G       T T G C
      T A G        A     AGGTT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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