The detailed information of tRNA gene sequence


Sequence ID>WENV170004660
Genome IDAHKK01001817
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 889
End posion on genome 976
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attattttgt
tRNA gene sequence 
GCCGGAGTGGTGAAATTGGTAGACGCAGAGGACTCAAAATCCTCCGAACTTTAAGTTCGT
GTCGGTTCGATTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
aggaaaaaca
Secondary structure (Cloverleaf model)
>WENV170004660	Leu	CAA
                   t      ACCA aggaaaaaca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGAACTTTAAGTTCGT
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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