The detailed information of tRNA gene sequence


Sequence ID>WENV170004668
Genome IDAHKK01004366
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 261
End posion on genome 174
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cataactgat
tRNA gene sequence 
GTCGGGATAGCCAAGAGGTCTACGGCGGTAGGTTGCTAACCTACTTCCCCTTCGGGGAGC
GAGGGTTCGAATCCCTCTCCCGGCGCTA
Downstream region at tRNA end position 
tgtcaaatcc
Secondary structure (Cloverleaf model)
>WENV170004668	Ser	GCT
                   t      GCTA tgtcaaatcc
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     G
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       C G G C
      C T A        G     TTCCCCTTCGGGGAGC
                    G - C
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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