The detailed information of tRNA gene sequence


Sequence ID>WENV170004671
Genome IDAHKK01005444
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 403
End posion on genome 491
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccccggaact
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGACGATGGCGACGGTCTTGAAAACCGTTGTGGCGACAAGTCAC
CGTGGGTTCGAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
gatgaacaac
Secondary structure (Cloverleaf model)
>WENV170004671	Ser	TGA
                   t      GCCT gatgaacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     TGTGGCGACAAGTCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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