The detailed information of tRNA gene sequence


Sequence ID>WENV170004672
Genome IDAHKK01005444
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 517
End posion on genome 609
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgatactc
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTTGATCGGGGCCGCCTGCTAAGCGGTTGTGGGGTTAATAGCT
CCACCCAGGGTTCGAATCCCTGCCTCCCCGCCT
Downstream region at tRNA end position 
tttcgcgccc
Secondary structure (Cloverleaf model)
>WENV170004672	Ser	GCT
                   c      GCCT tttcgcgccc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       +   | |                 T T
    T       T C G G
      T G A        G     TGTGGGGTTAATAGCTCCACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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