The detailed information of tRNA gene sequence


Sequence ID>WENV170004674
Genome IDAHKK01005586
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 218
End posion on genome 305
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagatagggT
tRNA gene sequence 
GCCAGGGTGGCAGAGTGGACAAATGCGGTGGCCTCGAGAGTCACTGTCCCTTTTGGGACG
CTCAGGTTCAAATCCTGACCCTGGCGTaa
Downstream region at tRNA end position 
ggttcgcttt
Secondary structure (Cloverleaf model)
>WENV170004674	Ser	CGA
                   T      GTaa ggttcgcttt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      T G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCTTTTGGGACGC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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