The detailed information of tRNA gene sequence


Sequence ID>WENV170004678
Genome IDAHKK01006432
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 1681
End posion on genome 1766
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgagaagga
tRNA gene sequence 
GCCAGGGTGGCAGAGTGGACAAATGCGGTGGCCTCGAGAGTCACTGTCCCTTTTGGGACG
CTCAGGTTCAAATCCTGACCCTGGCGtta
Downstream region at tRNA end position 
atcnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170004678	Ser	CGA
                   a      Gtta atcnnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     A G T C C     A
      T G A        G      | | | | |     A
    G       G A C G       T C A G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     TGTCCCTTTTGGGACGC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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